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GT19940

CSHL Arabidopsis genetrap mutant lines

Original: GT19940

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19940

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6865597 [Map]; Strand: c
      • AT4G11280.1 - [+] show detail - 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT19940 - 5-prime edge
    ATCCCGGTTC ATGGCACTGG AACAGAACCG CCTGGAGACA CGTTGAGCTT 
    CACTTGGTGA ACAATCACAC GCCATAGTTC GGTTTCCGAA TCAAACGTTG
    CTGTCTTCAA AAGATTTCTT AAATCCATCC ACAAGAACAA ACCGGCTTTG
    GCCTTTAACC AACCAATCCC TAAACCATCT AAACCGGTGG TTATCTCAGC
    GTGCCTTGCA GCTAACCGCA ATTTGCTCTC GCGGATAAAC TCGTCTACAA
    ACTCTTCATC GGATAACATT TTAGCGATCA AATGCTGCGT TTGTGACGAA
    ACAAGACCGA AACTCGACAT TTTCCTTGCG ATCTGAACCA CCCTGTCATT
    GTAAGAGTAT ACTATACCAA CTCTTAAACC AGGCAGACCC ATATCTTTAG
    ATAGACTATA CACAATATGT ATCAAATCGC GGTTACAATC TTCGATCTCC
    TCGATTACTT CCGCAACACT TATGAACTCG GATTGACCAA AAGTAGTAGC
    AGCATAAATC TCATCAGCAA TAAGATGAAT CCCTTTGTCA TTAGTGAAGT
    TAACAAGAGA CTTCAAACAT TCCCGGTCTA ACGTCGTACC AAGCGGGTTT
    GAAGGATTGG TTACAAGTAA ACCCTTAACC GGAATATTCG ATTTTCTCGC
    GTTTTCGTAA GCAGCTTCCA AGGCTTCCAC CGTAATCTTG AACCCATTAG
    AGCTATGACA AGTAACCGGT ACAAGATTCA CTCCGGTTCT CCATCTCAAA
    TCTCTATCAA ACCTGAAACC AAACCAAATC AAATTTAGAA CCCAAACCAA
    ACTAAACCAA ATTCTAATGT GATTCAGTGA TGATCTTTGA ACATA

AT4G11280.1

Model type
Protein coding
Short Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
Curator Summary
encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family
Computational Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR