1. Home
  2. Mutant Lines
  3. GT19940

GT19940

CSHL Arabidopsis genetrap mutant lines

Original: GT19940

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19940

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6865597 [Map]; Strand: c
      • AT4G11280.1 - [+] show detail - 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: GT19940 - 5-prime edge 
    ATCCCGGTTC ATGGCACTGG AACAGAACCG CCTGGAGACA CGTTGAGCTT 
    CACTTGGTGA ACAATCACAC GCCATAGTTC GGTTTCCGAA TCAAACGTTG 
    CTGTCTTCAA AAGATTTCTT AAATCCATCC ACAAGAACAA ACCGGCTTTG 
    GCCTTTAACC AACCAATCCC TAAACCATCT AAACCGGTGG TTATCTCAGC 
    GTGCCTTGCA GCTAACCGCA ATTTGCTCTC GCGGATAAAC TCGTCTACAA 
    ACTCTTCATC GGATAACATT TTAGCGATCA AATGCTGCGT TTGTGACGAA 
    ACAAGACCGA AACTCGACAT TTTCCTTGCG ATCTGAACCA CCCTGTCATT 
    GTAAGAGTAT ACTATACCAA CTCTTAAACC AGGCAGACCC ATATCTTTAG 
    ATAGACTATA CACAATATGT ATCAAATCGC GGTTACAATC TTCGATCTCC 
    TCGATTACTT CCGCAACACT TATGAACTCG GATTGACCAA AAGTAGTAGC 
    AGCATAAATC TCATCAGCAA TAAGATGAAT CCCTTTGTCA TTAGTGAAGT 
    TAACAAGAGA CTTCAAACAT TCCCGGTCTA ACGTCGTACC AAGCGGGTTT 
    GAAGGATTGG TTACAAGTAA ACCCTTAACC GGAATATTCG ATTTTCTCGC 
    GTTTTCGTAA GCAGCTTCCA AGGCTTCCAC CGTAATCTTG AACCCATTAG 
    AGCTATGACA AGTAACCGGT ACAAGATTCA CTCCGGTTCT CCATCTCAAA 
    TCTCTATCAA ACCTGAAACC AAACCAAATC AAATTTAGAA CCCAAACCAA 
    ACTAAACCAA ATTCTAATGT GATTCAGTGA TGATCTTTGA ACATA

AT4G11280.1

Model type
Protein coding
Short Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6
Curator Summary
encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family
Computational Description
1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 (ACS6); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: ACC synthase 1 (TAIR:AT3G61510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR