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GT19943

CSHL Arabidopsis genetrap mutant lines

Original: GT19943

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19943

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 186652 [Map]; Strand: c
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon2 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT19943 - 5-prime edge 
    TTGCTCATGG CTACACCAAA GGTTCTGGCC TTGGTGCTGA AATCATCGGA 
    ACATTCGTTC TCGTCTACAC TGTCTTCTTC TCTCTCGACT ACAAGAGAAG 
    CGCCCGTGAC TCACACGTCC CGGTATGGAC CCCTCTCTTA GTTCCGGTTT 
    GCTGATTTTA TTGCTTTAAT TAGACTACTA ACCGATCGAA TTTCCCCGGT 
    TTTATTGGTT TAACAGTTTA TGACTAATAA TTGGTCACTC TCTATTGTAG 
    ATTTTGGCGC CGCTCCCAAT CGGATTTGCA GTGTTCTTGG TACACTTGGC 
    AACAATACCG ATCACCGGGA CCGGAATCAA CCCAGCTAGA AGTCTTGGAG 
    CCGCAATTAT CTACAACAAG GACCACTCTT GGGATGACCA TGTGAGTAAA 
    CAACTCTAAT GAAAAGGACA ACTCAAAACG TATTATGATG TTTTCTAATA 
    TATTTGAATT TGTAAAATTG TGGTGGTTGT TGCAGTGGAT TTTCTGGGTT 
    GGACCATTCA TTGGAGCAGC TCTAGCAGCA CTATATCACC AGATTGTCAT 
    AAGAGCGATT CCTTTCAAGA GCAAGAGTTA GAGACACACA GAAAGATTCC 
    ACGGTCCAGA ATTTGTTCTT TAGTAGTTTC TTTGCTTATC TATCTAATGT 
    AGCTTGTGTT TTGCAATGTA ATGAGCCTTT CAAGAATATG TATTTGGGAT 
    TTCTAATCAG CTTTTGTCTA TGTAAAAACC ATGGTTTATC TTTAAATGTT 
    GTTTGAGGTT GGCCTCTTCT GTGTTTCT

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR