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GT19954

CSHL Arabidopsis genetrap mutant lines

Original: GT19954

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19954

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 256061 [Map]; Strand: c
      • AT2G01570.1 - [+] show detail - GRAS family transcription factor family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19954 - 5-prime edge
    CTTGAAAAAA GACCGAGCGA TACGGAAGCT GTTGCGGTGA ACTCTGTTTT 
    TGAGCTACAT AAGCTCTTAG GTCGTCCCGG TGGGATAGAG AAAGTTCTCG
    GCGTTGTGAA ACAGATTAAA CCGGTGATTT TCACGGTGGT TGAGCAAGAA
    TCGAACCATA ACGGACCGGT TTTCTTAGAC CGGTTTACTG AATCGTTACA
    TTATTATTCG ACTCTGTTTG ATTCGGTGGA AGGAGTTCCG AATAGTCAAG
    ACAAAGTCAT GTCTGAAGTT TACTTAGGGA AACAGATTTG TAATCTGGTG
    GCTTGTGAAG GTCCTGACAG AGTCGAGAGA CACGAAACGT TGAGTCAATG
    GGGAAACCGG TTTGGTTCGT CCGGTTTAGC GCCGGCACAT CTTGGGTCTA
    ACGCGTTTAA GCAAGCGAGT ATGCTTTTGT CTGTGTTTAA TAGTGGCCAA
    GGTTATCGTG TGGAGGAGAG TAATGGATGT TTGATGTTGG GTTGGCACAC
    TCGCCCACTC ATTACCACCT

AT2G01570.1

Model type
Protein coding
Short Description
GRAS family transcription factor family protein
Curator Summary
Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.
Computational Description
REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR