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GT19960

CSHL Arabidopsis genetrap mutant lines

Original: GT19960

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19960

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9783262 [Map]; Strand: w
      • AT2G22980.4 - [+] show detail - serine carboxypeptidase-like 13
        Distance: 11; Region: intergenic
      • AT2G22990.1 - [+] show detail - sinapoylglucose 1
        Distance: -3054; Region: intergenic
    Flanking Genome Sequence: GT19960 - 5-prime edge
    TTGTTTTGAT GTAGACTACT GAATCCCTTG CCTGCTTGAA TTCAAAATTT 
    TAATTTGTAC GACGGACTGT TCACTCATAC ATACCGATGG TGATTTTAGG
    GGTTGGTATT TTCATATTCT GTTTGGTTAA TCTGGTTTTT GTAAACCAAT
    GTAAATCGCC CAGACCGTCT TACCAGTAAC ACCCACAATT CTCTCGGACA
    TGTGAGATCC AGCCCTATCC GACCGTATAT ACGCCATGTT CAGAAGGTTG
    TAAAGACTTG TTTACCAATT CTATAAATTA TCGTATGATA TTTTTATATG
    TTTTCACACG GTTTTGACAA TTATTTTTTG GAAGATCACC TATTCTGAAA
    TTGCTGCAGT CCAAACACGT TTAAATGTAT AATTTGTTTC AAAATAGTTG
    ACCAAAAAAT AAATGTGATT TGGCGATATA AGTGACAAAA TTAATTCTTT
    TAAAACGGGT AAATGTAATT TTGGTTTTCT TATCGTTTTA TTCAAACAAA
    ATTCATTGTA TAACTCGTGA GAAAGGTATA TGTAAGTTTA TGTTGTATGA
    CGAGAAAAAT CACACGACGT CAATATGTGA ATGCAAGATC TGCACTTTAA
    ATTTTGCTAT AAGATCTAGG GATATGGTCT AGATTCTCAT CGTATGAGCC
    TAATGATTTT ATGATTGAAG TAATCGACGA TTTGGATTTG TATTAACGAA
    CTGAAAAATG AGAGTACAAA AGAGATCTCT TTAGACATGA CAAATTTTTT
    TTGTTGAGTA TTTTTCTGAC TAAACATTAC ACCCAAAAAA CATAAGTATT
    CTTTCTGGC

AT2G22980.4

Model type
Protein coding
Short Description
serine carboxypeptidase-like 13
Computational Description
serine carboxypeptidase-like 13 (SCPL13); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 11 (TAIR:AT2G22970.3); Has 4003 Blast hits to 3936 proteins in 468 species: Archae - 0; Bacteria - 512; Metazoa - 625; Fungi - 814; Plants - 1533; Viruses - 0; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G22990.1

Model type
Protein coding
Short Description
sinapoylglucose 1
Curator Summary
sinapoylglucose:malate sinapoyltransferase. Catalyzes the formation of sinapoylmalate from sinapoylglucose. Mutants accumulate excess sinapoylglucose.
Computational Description
sinapoylglucose 1 (SNG1); FUNCTIONS IN: sinapoylglucose-malate O-sinapoyltransferase activity, serine-type carboxypeptidase activity; INVOLVED IN: phenylpropanoid metabolic process, proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 9 (TAIR:AT2G23010.1); Has 3959 Blast hits to 3880 proteins in 457 species: Archae - 0; Bacteria - 470; Metazoa - 646; Fungi - 843; Plants - 1550; Viruses - 0; Other Eukaryotes - 450 (source: NCBI BLink).
Link
InterPro Scan - TAIR