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GT19971

CSHL Arabidopsis genetrap mutant lines

Original: GT19971

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19971

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 205732 [Map]; Strand: c
      • AT2G01460.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -404; Region: promoter
      • AT2G01460.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -404; Region: promoter
    Flanking Genome Sequence: GT19971 - 5-prime edge 
    CCAAAAAGAA ATTAAATTTT TAGCTGAGAT TAACTCTATT TTTAAGATTT 
    TGTAACTATT ATACCATTTT AATTGGTTTA TTTTTTAAAA AAATATATTA 
    ATCAATGGAA TATTAATTAT ATTTCTATAA TTAATTGGTT AATTTCCATT 
    GGAATATTAA TTATATTTAA AGTTAGGCTG ATTTTCAATG GTTGACAAAG 
    AAAAAAAGAA AAAAAGGAAA AGTAGTTACG TTTCTATTAA GGGGATTGGA 
    TTATAGGTGT GAATATAGCT ATTTTTTCAT TTTTTTAAAA ATTAATTAGC 
    GTGTGCTTTT ACTGAACGTT GCGACAACGG CAACAACGGA GTAAGACGAA 
    TTGTCATGAG AAGTAGCAGG TAAGTAAAAC GACATTAGAA CTTAAAATAA 
    CAACTTTGGA GGAGACGCCG ATT

AT2G01460.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, kinase activity, nucleotide binding, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), ATPase, AAA+ type, core (InterPro:IPR003593), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1); Has 3953 Blast hits to 3156 proteins in 1342 species: Archae - 38; Bacteria - 3073; Metazoa - 244; Fungi - 122; Plants - 227; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01460.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1).
Link
InterPro Scan - TAIR