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GT19983

CSHL Arabidopsis genetrap mutant lines

Original: GT19983

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19983

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 320986 [Map]; Strand: w
      • AT4G00752.1 - [+] show detail - UBX domain-containing protein
        Distance: -91; Region: promoter
    Flanking Genome Sequence: GT19983 - 5-prime edge 
    GTAATCACTA TTTAATTTTA AATTCAATTT TGTCGCTTAT AAAATAATAA 
    TAATTTACGT TAGTCATTAT TATCGATTCG ACGTTCTTTC AATCTTTTGT 
    TCCACTCGAT AAAACTCTTC GAGTTCCGTA GAAGTCATGA TTGCTTCTGT 
    TCCTTTATGC TCTTCACAAA TACAGTAGAA GATTAAAGAA AAAAAACCCG 
    AAAAAAAAAA ATTTCCCCCC AAAAAATACT TGAAATCAAT TTCCACCCCC 
    CCCAAAAACA GGGGCTGGGA AAAAAGGGGG TGGGTTTAAC AAGAAAACCC 
    CAAAACACCC CTTCCCGGTT GGGGGGGGAC CCCTGGATCA ATTTGTAACG 
    GGGAACCGTT TGGAAAAAGG GAAAAAAAAT CCTGGGGAAA AT

AT4G00752.1

Model type
Protein coding
Short Description
UBX domain-containing protein
Computational Description
UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR