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Mutant Lines
GT19991

GT19991

CSHL Arabidopsis genetrap mutant lines

Original: GT19991

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19991

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 18910206 [Map]; Strand: c
- AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
  Distance: -784; Region: promoter

TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAATCA TAGTTCTAGT 
AAAGTAAACA TTCGTGTGTG AGTGACATAA TAATTGCTTC AAAAAGAAAT 
AACGAATTAA TAAGAGTTGT GTGCTTGATG GTCCAAAAGT CGTATGTTTT 
TCACCATCAC AATAAGATTT ACCATATCTA CTTAAACCAA ACTTCAATCT 
ATGATATTTG GAAGCTAGCA ATGAATGATT TTGTTTTAGC ATATGTTACC 
GAGCCTATTC ATCTTTAGAT TGACATTCGC ATTTTAAAGT TTTGTGTCCA 
ACAACTAGCA AACCCTTCGC TTTTTAAACC AAGATCAGTT TTTCTACATA 
GTTTCGACTT TTTGTTATTT TACTTCCCAT CATATTTTGT TTTATTTACT 
ACTGACATTT TCATAATGTA CGGTACATTT TCATATATTA GCATCCTTAT 
CTAAAAGCTA ATCCACTCCA TAACGTACTT GAAAT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 18909895 [Map]; Strand: c
  - AT3G50860.1 - [+] show detail - Clathrin adaptor complex small chain family protein
    Distance: 5698; Region: intergenic
  - AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
    Distance: -1095; Region: intergenic
Flanking Genome Sequence: GT19991 - 5-prime edge
```
TTCTCTTTCA ATATAATGCT ATAAAACCTC TGTCTCTTTC CGTATCTCTG 
CCCTAAAAAC CTGAATCTCA CGCGCTCCTG CTCAGTTGCG CGTGGCCTCG 
TCCTTTACTT CTCCACATCG CAATCACACG TTCGATATCT GCTCAGCCTC 
ATGTGGTTAA TGATGATCCA TGATGAT
```

AT3G50860.1

Model type: Protein coding
Short Description: Clathrin adaptor complex small chain family protein
Computational Description: Clathrin adaptor complex small chain family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, clathrin vesicle coat; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein complex, sigma subunit (InterPro:IPR016635), Clathrin adaptor, sigma subunit/coatomer, zeta subunit (InterPro:IPR000804), Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT2G19790.1); Has 2004 Blast hits to 2002 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 926; Fungi - 430; Plants - 303; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G50870.1

Model type: Protein coding
Short Description: GATA type zinc finger transcription factor family protein
Curator Summary: Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.
Computational Description: MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link: InterPro Scan - TAIR