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GT19998

CSHL Arabidopsis genetrap mutant lines

Original: GT19998

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19998

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16086199 [Map]; Strand: c
      • AT4G33420.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: GT19998 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTCTAG GCTACTATGT 
    AAAAATTGTG TACTCTCGTA ATATGCAGTT GTATACTTAT TGCTTGTGTG
    GTTCAGATAT CCATCAAAAA GTAATATACT TTGGTTGCAT TTTCTTGTCC
    AATTGCTATT TAAAGGCAAA AGTCTCCTTT TCTTCTGAAC AATCTCCGGA
    TCTAGAAATC ACATGATAAC ACAGAAACCG GTAAGAAAAG AAACCTGACG
    CACGGTGAAA AAGAATAATT GATGGGATAC ATATTTGTGA ATCAAGTGCG
    CAACAATCCT CAAGTGGTGA GCTTAAGACA TGTTTGGGTT TTAGCTTTCA
    ACAACATTCA AATCCTTTTT CATCATATAA CACTTACAAA CCCAATCTGA
    TCCTCATGTA TTCACTTAAG AACCAATAAT ATGGAGCAGC AAAAGCTAAA
    ACCCTCAATA AATACCGAGA AAAACAAAAT ACAGAAAAAA CATTCGTGTT
    TCGAATCTTA ATCTTGGACC CGAGGGGTAT T

AT4G33420.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G51890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR