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GT19999

CSHL Arabidopsis genetrap mutant lines

Original: GT19999

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT19999

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2943146 [Map]; Strand: w
      • AT3G09580.1 - [+] show detail - FAD/NAD(P)-binding oxidoreductase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT19999 - 3-prime edge
    TTACCGACCG TTACCTTCCG ATTTCATCCC GCAGAGCTAG GTGTTATACT 
    CGCCGTCGAG CAACCGGAAG TGAATAAGCT TCTCGATGGG ATCAGAGACC
    CGGTTATAAC AAAACCAGCT CGGAGCACTA TTTGTCTTTA CTTCACAGCT
    GAACCGAACC AAATACCGGT ACAAGACCCG GTTCTATTTC TCAACGGGTC
    AAATTCCGGT ATAATCAACA ACATGTTCTT CGCTACAAAC GTTGCTCGGA
    CATACGCGCC ACCGGGAAAG GCTCTGGTTT CGGTATCATT GATCGGATTG
    TTTGAGGATA GAACCGATGA TGATTTAGCA GCAGAAGTTC TTAGAGAACT
    CTCTGGTTGG TTTGGTGAGT CTCCGGTTAT GTCATGGAAA CATTTGAAAA
    CATACCGGAT CCAATTCGCT CAGCCTAACC AATGTCCACC CACTGATTTG
    GTCAAGAGTC CTCGGGTCGG GTCGGGTCTT TACTTGAGCG GTGATTACAT
    GACTTCTGCT ACATTTGATG GAGCTTTGGT CTCTGGGAGA CGAGCCGTGG
    AAGTTTTGCT ACGAGAAACG GGACTAATCA AATAGATTTT TT
  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT19999 - 5-prime edge
    ATTTCTCCGA TTCCCATGGC TGGAAGTGGG ATTTCTCCGA GAG

AT3G09580.1

Model type
Protein coding
Short Description
FAD/NAD(P)-binding oxidoreductase family protein
Computational Description
FAD/NAD(P)-binding oxidoreductase family protein; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2908 Blast hits to 2906 proteins in 704 species: Archae - 36; Bacteria - 1433; Metazoa - 261; Fungi - 51; Plants - 352; Viruses - 0; Other Eukaryotes - 775 (source: NCBI BLink).
Link
InterPro Scan - TAIR