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GT20028

CSHL Arabidopsis genetrap mutant lines

Original: GT20028

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20028

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26399247 [Map]; Strand: c
      • AT1G70080.1 - [+] show detail - Terpenoid cyclases/Protein prenyltransferases superfamily protein
        Distance: -1682; Region: intergenic
      • AT1G70090.1 - [+] show detail - glucosyl transferase family 8
        Distance: -1543; Region: intergenic
    Flanking Genome Sequence: GT20028 - 3-prime edge 
    ATTTTACAAC ATAATGAAGC ATAAAATTGG GTTGCCTCCA AGTTAGGATA 
    TAACATCAGA AACAAGAAGC AAAGGCAAAG AGCTCTGCTT AATACTACAA 
    CTGT

AT1G70080.1

Model type
Protein coding
Short Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Computational Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT3G14520.1); Has 1724 Blast hits to 1694 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1720; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70090.1

Model type
Protein coding
Short Description
glucosyl transferase family 8
Curator Summary
Encodes a protein with putative galacturonosyltransferase activity.
Computational Description
glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 2070 Blast hits to 2058 proteins in 476 species: Archae - 0; Bacteria - 1035; Metazoa - 229; Fungi - 4; Plants - 727; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Link
InterPro Scan - TAIR