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GT20030

CSHL Arabidopsis genetrap mutant lines

Original: GT20030

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20030

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2164249 [Map]; Strand: w
      • AT1G07040.1 - [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chlorop...
        Distance: -941; Region: promoter
      • AT1G07050.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: GT20030 - 5-prime edge 
    TTTCTTTTTT ATGTCAATAA GATATTTTCA TTTCACTACG ACAGAAGTTG 
    TAAAAGTCGA TAATGATATC TCAAAACTAC GAATAATAAT AACAGAAAAT 
    AGACACAACA AAGGTTGGAG ATATTTTTCT CCAGATATTT TTGCCCCTTT 
    TAAGTCTCTC TTTTCACGAA CCGACCCTAC AAATAATTCA AAAGATTTCC 
    ATTGCAAGAG AAATATAAAG TTAGGCCTCA CAATATTAAT TGGTGTCATG 
    AAACTAAATG AGTAAAGGCT AGAGTGTAGA AAGAAGAAGG AATAAGAAAG 
    AGACCTTAAA ACGAGGTCGT TTATCTGCGT TGAGTTTTCG GACTTGGTAC 
    CTTATCTTCT TAGAGAAGAG CCTACTCTGT CTTTTCTCTT TGTACCTTAA 
    CACACTTGCT TCTCTTCGCA TGTTTCTCTT CTCCTCTATC ACTGGCACTT 
    CTCCCCTCTG CATACACTCT AAATCATTAA TATTGACTAA TCAAGATTAA 
    TCACTACTCA TAACTTGCAC AACAAGAAAG AGATTCATAA AAACTAACAT 
    AAACGGAATT GTCCAGAGTT GAAGTATCTG TCCACAGAGG TTTCTGGTGA 
    TCAGACCAAG CATCGATAAC TTCTTGATGG TTCAGATTCA GCTTCAGACC 
    CAAGTCTTTG TCTTC

AT1G07040.1

Model type
Protein coding
Computational Description
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07050.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT4G25990.1); Has 1772 Blast hits to 1772 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1711; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR