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GT20036

CSHL Arabidopsis genetrap mutant lines

Original: GT20036

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20036

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2927857 [Map]; Strand: c
      • AT3G09530.1 - [+] show detail - exocyst subunit exo70 family protein H3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20036 - 3-prime edge 
    ACGACGTTCG ACGTTTCTCC TATTCGGAGC GGGGAGATGT CGCCCGAGAG 
    CGATGATGCA ATTCAAAAAG TTCAACGAGA CTTTCGAGAG CACGTGCGA

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT20036 - 5-prime edge 
    AACTCCTCCA TCACGAACCA CTGTCTTGGA CGAGACATTT CGTATTTGAC 
    ATT

AT3G09530.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein H3
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein H3 (EXO70H3); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H4 (TAIR:AT3G09520.1); Has 786 Blast hits to 774 proteins in 86 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 29; Plants - 616; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR