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Mutant Lines
GT20048

GT20048

CSHL Arabidopsis genetrap mutant lines

Original: GT20048

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20048

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 16631286 [Map]; Strand: w
- AT4G34900.1 - [+] show detail - xanthine dehydrogenase 2
  Distance: 0; Region: exon1 (CDS)
- AT4G34910.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -247; Region: promoter

TCGAGAAGCG TCATGTGAGC TAATCCATCA GGCAAAACTC TACGAACACC 
ATTAACGTAC ATTATTGCCT CCATGAACTC GTTCTGCTCC ATCTTCACTG 
AACCCAGACG AATAACTGTT ATCCAATAAT GGCAAATATC CAATAATGGC 
AAAAATCCAA TAATTGCAAA ATCTTCTCTT TTTAAAATGT TTTTTTTTTT 
GTTTTCTTTT TTCAACAAAA AAAAGAAAAC CCCATTTATA AACCCCAAAA 
AAAAAAAGGA ACCCCAAAAA AACCCCAAAA TGGAATCCTT CAATCAGGTC 
GGGAACTTTA AAAAAACTCA TAAACATTCA AACAAAGAAA ACCCGGCGAA 
GAAGGTTTTA CAACAATTTT CCCTTCATTT CTTCATTTTC TTCCGGCCCC 
GTTTTTCAAA CCTATTCAAC CAAAAAAGCT CGAAAATTTC AAATTCCAGG 
GGAAAAACAA ATTTAAAACC GGGGAAGAAT GTAAACTCGA AAGGGGGGAA 
CAAATTTAAA AAACCAAAGA AATTTAAGAA ACAAAAAACC CACAAAAAAC 
AAAAAAAAAA CCAAAAAAAA AAAAAGGCAA CTAAAATTTT CAAAAACCTA 
GGGTTTAATT CCCGTCAAAT TCGGGCCCAA ACTAAAAAGG GAAAAAAAAA 
ACCACCCCTT ATT

AT4G34900.1

Model type: Protein coding
Short Description: xanthine dehydrogenase 2
Computational Description: xanthine dehydrogenase 2 (XDH2); FUNCTIONS IN: in 8 functions; INVOLVED IN: oxidation reduction, allantoin biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), FAD-binding, type 2, subdomain 1 (InterPro:IPR016167), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: xanthine dehydrogenase 1 (TAIR:AT4G34890.1); Has 21587 Blast hits to 20745 proteins in 1345 species: Archae - 453; Bacteria - 12993; Metazoa - 1073; Fungi - 109; Plants - 266; Viruses - 0; Other Eukaryotes - 6693 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34910.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT5G60990.1); Has 35246 Blast hits to 34671 proteins in 2939 species: Archae - 524; Bacteria - 16250; Metazoa - 5646; Fungi - 4238; Plants - 2336; Viruses - 4; Other Eukaryotes - 6248 (source: NCBI BLink).
Link: InterPro Scan - TAIR