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GT20076

CSHL Arabidopsis genetrap mutant lines

Original: GT20076

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20076

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4174250 [Map]; Strand: c
      • AT5G13150.1 - [+] show detail - exocyst subunit exo70 family protein C1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20076 - 5-prime edge 
    TTCCATGATT TTTCACCGGA ATCGATCTCG ACCTTTTTAA AGATCGCCGG 
    AGCGATGATC TCCGCCGGTT ACCCCTTTAA GTGTTGTATG TCATACGAAA 
    TGTCGAGACG GCACGCGTTC AAGGAAGAGC TAACCGAGGT TGGATTCTAA 
    GGGATCAACG TTGAAGACGT GCAGAGAATA GGTTGGGAAT CTCTCGAAGG 
    TGAAATCGCT TCGTGGATCT CAATCGTTCG CCGTTGCTCC ACCGTGCTTT 
    ATCCCCGGCG AGCTTTCTCT CTGTAACGCC GGCTTTCCGG AT

AT5G13150.1

Model type
Protein coding
Short Description
exocyst subunit exo70 family protein C1
Curator Summary
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Computational Description
exocyst subunit exo70 family protein C1 (EXO70C1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein C2 (TAIR:AT5G13990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR