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GT20092

CSHL Arabidopsis genetrap mutant lines

Original: GT20092

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20092

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5085876 [Map]; Strand: w
      • AT3G15110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -33; Region: promoter
      • AT3G15111.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20092 - 5-prime edge 
    CTGTCTGCAA CACTAACATT ATTCTTAGCC GTCGAAAGAT TTTTATCTCA 
    CCATTCATTT CTTCTTCAAA TATCCTCACT CTAAAGCCTC TCTATCGTTT 
    AGAGGGTCTC TTCTTCGTAG ACACTCTCCG CGAATTAGAG GCTTCCCAAG 
    TTACCATTAT ACTACAGAAA TAGTAAGTAC CACATTTTAT ATAGTTTCAC 
    TTGATTGTTT ATCGCATTCT TCTTCATGTA AAATATTACT TGAGTTCGGT 
    TTCTCCGTCG AATAAAAAAA CTCATCATTA TGATTGTTAT TTTTCCTTAT 
    TATTGTAGGT GAAATGAGAG ATGAATGTTT TTTG

AT3G15110.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15111.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR