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GT20155

CSHL Arabidopsis genetrap mutant lines

Original: GT20155

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20155

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29006114 [Map]; Strand: w
      • AT1G77200.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -1023; Region: intergenic
      • AT1G77210.1 - [+] show detail - sugar transporter 14
        Distance: 2825; Region: intergenic
    Flanking Genome Sequence: GT20155 - 3-prime edge 
    AACCGATTTC ATCCAGAGCT CCTATCTATT TGGACTAGAA AGGTGTAAGC 
    AACTAATATC TATGCATCAA AGATGAATGA AAAAGACCAA AGTTTTGGCC 
    AAAAAAATGA AAATTAAAGA GACCAAACAT GTTATACTAA TATATTATGT 
    GTAGTATTTC ATAATTTCTT GATTCGAACT TTGATCTAGT TGGGGAACTC 
    GGCTTCCATC GAAAGACATT CATTTCCTAC TAAATTGTAT AATTTTTTAT 
    TTTTCGAAAG ATACAAGACG ACAAACAAAC ACACACACAC ATATATATAT 
    ATATATATGA GAGTGTATCT CTCCATTTTA TCTATATATT GTGTAAGGAA 
    ACACTAGGCG ACAAAAAAAA AA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29006232 [Map]; Strand: w
      • AT1G77200.1 - [+] show detail - Integrase-type DNA-binding superfamily protein
        Distance: -1141; Region: intergenic
      • AT1G77210.1 - [+] show detail - sugar transporter 14
        Distance: 2707; Region: intergenic
    Flanking Genome Sequence: GT20155 - 5-prime edge 
    AGAAAGTCGC GGTTTACGTT AATAAAAATG CAAATAACCA CCTTTTAGAG 
    TATGATTTAC TTACTTGTTT TGGGGGTAGA AATGATGAGA ATTGAGAGGA 
    GGGGAAGAGG AAAAGAGATA ATTAGGAGAG ACCCACGAGG AGTGAAGGCT 
    GTTTGCCCCC ATCTGAGCAT GGCATTTCTG ACAGTTGGCA ACACCCTTCC 
    CACATGCCTT CTTTTTAATC TCCTCTAATT TTCATTTTTC TTATCATCAT 
    TCTTCCATAC ATTCGATATT TAATGTTCAT TTACCACATT TTTATATCAT 
    TATTTAACAC ATTTCCGTAT TTTATTTACC AGCTCTTCTT CTTCATAGCA 
    TCGTTGTAGT GGATTATTAA TCTAGCTTTA GTATTTTTAT GATGTTGACG 
    TTTTAGTACC TGAGAGTATC ATTTGAA

AT1G77200.1

Model type
Protein coding
Short Description
Integrase-type DNA-binding superfamily protein
Curator Summary
encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
Computational Description
Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G32800.1); Has 5976 Blast hits to 5749 proteins in 268 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 21; Plants - 5816; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G77210.1

Model type
Protein coding
Short Description
sugar transporter 14
Curator Summary
AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose.
Computational Description
sugar transport protein 14 (STP14); FUNCTIONS IN: galactose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1); Has 28233 Blast hits to 27797 proteins in 1954 species: Archae - 451; Bacteria - 13247; Metazoa - 4056; Fungi - 6843; Plants - 2415; Viruses - 0; Other Eukaryotes - 1221 (source: NCBI BLink).
Link
InterPro Scan - TAIR