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GT20179

CSHL Arabidopsis genetrap mutant lines

Original: GT20179

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20179

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 32751 [Map]; Strand: c
      • AT4G00080.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -142; Region: promoter
    Flanking Genome Sequence: GT20179 - 5-prime edge 
    CAAAGACCTG GATTAAGCAT CACTCGACTT GTATGCGTTT TTGTTTGTTA 
    GTTCCAGTGA TGAGCAGCTA GAGTTTGAAG GAAGGTTACC AGAAGGCCGG 
    CAAAGCAAGT ACCATATATC ATAAGTAAGT TAATTATAAG TGTATTCGTA 
    GTAAAATCAA TTTTGAACGT GATAAAAGAT ATTTATTCGA GCTAGGCATT 
    TGACCAGATG AATTAAAGTA TCTAACGTCT CATACCACAA CCTGTTGTAT 
    ATAGAACAGG CAGGATCTAC GTTATGAAAC ATAATCTTAT ATAATGTGAA 
    TATTATATGT GTATACTCAC ACGCGTAATG GAGAGGGTTT AACTGTTGAC 
    CCAAAGGGGG CGGCGGAGAA GACAAAAAGG AACAAGCTCG TGGCCAACAA 
    GATCCTTTTT TATAGCACCT TCCCTTCACT CTTTAAGCAA ATCTGCACAC 
    ACTTTTC

AT4G00080.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
unfertilized embryo sac 11 (UNE11); FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G62770.1); Has 574 Blast hits to 571 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 574; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR