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GT20235

CSHL Arabidopsis genetrap mutant lines

Original: GT20235

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20235

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 176001 [Map]; Strand: w
      • AT2G01410.1 - [+] show detail - NHL domain-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20235 - 5-prime edge
    TCTCCGTGGA GAGACGGGAG AGGAGAGAGG AATACACGAC GGCCTCCGCT 
    GCGGAGATCG TAGGAGGCTA GGGCACTGAA GGGAGGGAGA GGCGGCAAAC
    TCTGGATACA GGCAAGGAGA CGGCGATTAG TAGAGTCAAC GGCGAGACCG
    AGGATAGTGG AGTTCTCCGG TAGATCGAGA TCGGAGATTA GGGTTTCGAT
    GACTCCAGCG TCGGAGACGG AATGAATTGT GCGGCTGTGG AGAGAACCGA
    CTAGAAAATG CTGGTCCCTT GGATCCCAGG TTAGTCCCTC CGGGTAGAGT
    CCCGGCGATC GGAAGTTGAT AACGTGGCGG TTATCGGCGG AGGAGGGAAT
    CAGAAGTCCC AGGAACAAGA CGGCGAAGAG AATTGGGAAG ACGAAGAAGG
    ATCTGTATCG AGTGGAAGAC GACGACGACA TGTTCGCTTT CATCTGTGAT
    TTCGATTTAG GAAAATAATG AATGGCTCAT TTTTAGAAAA AATAAAACTT
    TGATGTATAA AAAGATATGA CCAAGCCCAT TTATGTAATA AACGGGCCAC
    ATTTTGCGTG TAGTATATAA AATAGGGCCC ATAAAGTTTA TTGGCCTTCC
    TTCATTTGCT GTGTTGATGT CAAAAAGAGA AGAGTAGTGC ATTGCTGTTT
    TATTGGCAGC TACTAATGAT TTGGTTTTGC TGATGGGCTC TTAATAGACG
    TCTCTCCACT ATACCCTATA CTTAGACTAT CAGGGCGAAT CATGGATATC
    TTTGTT

AT2G01410.1

Model type
Protein coding
Short Description
NHL domain-containing protein
Computational Description
NHL domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT2G16760.1); Has 137 Blast hits to 137 proteins in 39 species: Archae - 0; Bacteria - 57; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR