1. Home
  2. Mutant Lines
  3. GT20267

GT20267

CSHL Arabidopsis genetrap mutant lines

Original: GT20267

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20267

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 2478941 [Map]; Strand: c
      • AT5G07770.1 - [+] show detail - Actin-binding FH2 protein
        Distance: 0; Region: exon16 (CDS)
      • AT5G07770.2 - [+] show detail - Actin-binding FH2 protein
        Distance: 0; Region: exon17 (CDS)
      • AT5G07780.1 - [+] show detail - Actin-binding FH2 (formin homology 2) family protein
        Distance: -573; Region: promoter
    Flanking Genome Sequence: GT20267 - 5-prime edge 
    CTTAACATTG GAAGTGGAGG TGGTGGCGGT GGAGCTCCTC CACTCATCGA 
    GGGAACTGTT GGTGGTGGGG CTCCTTCGCG CACTAAAAGA GGTAGCGGAG 
    ATGTGCCCAT CACCAAGCGA GTTTGGAAAG GGATTGAACG TACATGACTC 
    AAGTGAGGAG GTGGAGCTGT TCTACTGGCA ACAAGCATTG GAGGTGGAGG 
    TGGTGGCGGT GGAGCTCCTC CACTCATCGA GGGAGGTGGT GGTGATGGGG 
    ATCCTACACG CACTAAGCGA GGTAGCGGAT ATGGGCCACA CACCAAGCGA 
    GGAGGCGGAT TAACTGCAGG TATTCGGCAG CATGCATACC TTGGACGTGA 
    AGGGGGTCTT GGTATAGAAG GCGGAGGTCT TATTCTAGAA GGCGATTTGG 
    CCTCCGAATC ATCTAAAGAA GTATCTGAGT CTATGTTGTG GGGGG

AT5G07770.1

Model type
Protein coding
Short Description
Actin-binding FH2 protein
Computational Description
Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 32498 Blast hits to 13926 proteins in 764 species: Archae - 52; Bacteria - 3235; Metazoa - 13136; Fungi - 3419; Plants - 6778; Viruses - 1558; Other Eukaryotes - 4320 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G07770.2

Model type
Protein coding
Short Description
Actin-binding FH2 protein
Computational Description
Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1).
Link
InterPro Scan - TAIR

AT5G07780.1

Model type
Protein coding
Short Description
Actin-binding FH2 (formin homology 2) family protein
Computational Description
Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR