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GT20308

CSHL Arabidopsis genetrap mutant lines

Original: GT20308

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20308

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3370414 [Map]; Strand: w
      • AT3G10760.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20308 - 5-prime edge 
    CTACTGATCG TCTTTTCGCT AGCTCTCCTG TTCCTGCTCA CCTTCTTCAT 
    CCCACTCGAG TTCCCAGTTC TGATCATTTC ATGCCGTCTT TTGTTCCTAT 
    TGCTACTCTT CAACAACAAC AACAAATGGC TGCTGCTGCG GCCGCTGCTG 
    CAGCAGCTAA TCCTCATTTA CAACCGCCTC AGTTCCACCG TCAAATCGCA 
    GCTGCGCATT TTGGTTCACC GACTAATGGT GGATTCATCT CTCTCGA

AT3G10760.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G05090.1); Has 1702 Blast hits to 1694 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 31; Fungi - 6; Plants - 1631; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR