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GT20314

CSHL Arabidopsis genetrap mutant lines

Original: GT20314

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20314

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11532441 [Map]; Strand: w
      • AT1G32060.1 - [+] show detail - phosphoribulokinase
        Distance: -92; Region: promoter
    Flanking Genome Sequence: GT20314 - 5-prime edge 
    AACCACATTA AACCAAAATA AAACTCCTTT TCTTCTCTGT CGACCACCTT 
    CGGGGTTTCC TATAGACCCA TTGGCCTCCT CTCATTCCTC TATGTCCCCA 
    TTTAATCTTA TTTTCAAAAA AAAAAAAAAA AACCCCTTCT TTTTTCCCCC 
    CCCAAAAAAC CCAAAAAAAA AAAAGGGGTC CCCCCCTTTT TTTTCTTTCT 
    TCCGGAAACC CCCCCCCCCC ACGGGGGGCC CCAAAACCCA AAAAAAAAAA 
    AGGGGGTGGG GGGGGGAAAA GGGGGACCCA ACCCCCAAAC CCCCAAAAAA 
    AAAAGGGGGG GGGGCCAAAT TTTTTCCCAA AAAAGGGCCC CAATTTCACC 
    TTTTTTTAAA CCCCTTTTTC CCCCCCCAAA AAGGGTTTCC CTCTGGGGGG 
    GGCACCCAAA AACCAGGGGG AATTTCACCC CCCGGGGGGG GGGGGAAAAA 
    AAACCCCGGG GGGGGGGAAA GGGGGGGAAC CGGGGGGGGG GAAAAGATCC 
    TTTTGGGGGG GGGCCCCCCG GGGTTTGGGG GGGG

AT1G32060.1

Model type
Protein coding
Short Description
phosphoribulokinase
Computational Description
phosphoribulokinase (PRK); FUNCTIONS IN: protein binding, phosphoribulokinase activity, ATP binding; INVOLVED IN: response to cold, defense response to bacterium, biosynthetic process, peptidyl-cysteine S-nitrosylation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribulokinase (InterPro:IPR006082); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6197 Blast hits to 6197 proteins in 2200 species: Archae - 37; Bacteria - 4118; Metazoa - 341; Fungi - 129; Plants - 1120; Viruses - 2; Other Eukaryotes - 450 (source: NCBI BLink).
Link
InterPro Scan - TAIR