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GT20315

CSHL Arabidopsis genetrap mutant lines

Original: GT20315

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20315

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19603895 [Map]; Strand: w
      • AT2G47870.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: 245; Region: intergenic
      • AT2G47880.1 - [+] show detail - Glutaredoxin family protein
        Distance: -1145; Region: intergenic
    Flanking Genome Sequence: GT20315 - 5-prime edge 
    ATTATCAGTT GATACGGAGA AACTAGACTG TAATCAATCC CCTCGTAAAG 
    ATTTCTGTTA ATATCGGAAT ATCATCTGGA CCTAGCATAA TATCTTCCGA 
    TTATAGAAAA AAATGTACGT AGTATAATAC CTAACCGATA TACAAATGAA 
    TATCGAACGT AACTATGCTA TAACTAGTAT ATATATGATC GTTTTTGAAT 
    CAAACATAAA AGAGAATCTC GCTCATGAAA AGATTACTAC ACCCACAAAA 
    CAATCGAAAA GTAAGCCAAG AATGACGCAG CAGAGTTAAC ATATGCGTGT 
    GATTCACGCG TGCGTCCGGC AAGAAAGACA TTTCGAGAGA AGTGAATCAA 
    ACATTAGTGT AAGTGTGAAA GAAGAATATA TAAAAAAGAA AGATGGAATA 
    ATTTTCTTTG GCAAGTTGGT GTTGGCGGAA TCACCATGTA CGATGCATAT 
    TGTTGATACA TATATATACA TGTTTATCAC CGAAAGGTCC AATCTTTTTC 
    ATTTATCCTC ACTTTGCGCA ATGACTCAAT CAAAGGAGAT ATGTTGAGAG 
    AATCCGTTAG ATTATAAATT GACAAGCCTC TTTTCTTTTT CTAGGGGTAT 
    TAATCATGCT ATATTTCTTC TCTCTCGA

AT2G47870.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Computational Description
Thioredoxin superfamily protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62950.1); Has 1288 Blast hits to 1284 proteins in 244 species: Archae - 0; Bacteria - 100; Metazoa - 228; Fungi - 164; Plants - 745; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47880.1

Model type
Protein coding
Short Description
Glutaredoxin family protein
Computational Description
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Glutaredoxin subgroup (InterPro:IPR014025), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT3G62960.1); Has 1229 Blast hits to 1227 proteins in 226 species: Archae - 0; Bacteria - 96; Metazoa - 226; Fungi - 100; Plants - 735; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).
Link
InterPro Scan - TAIR