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GT20321

CSHL Arabidopsis genetrap mutant lines

Original: GT20321

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20321

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1334673 [Map]; Strand: c
      • AT2G04040.1 - [+] show detail - MATE efflux family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: GT20321 - 5-prime edge 
    ATAGCCATTT CAGCTTTTTA CTCTTGTAAA TTCTTTTATG TTCATTCATT 
    AATGCTATGA AGTAATCTAT GATTTTGCAG GCTGAGAAGG CAAGGAAGAG 
    AATTGTCTCA ACTGAAAACA GATTGGCTTA AACAAAT

AT2G04040.1

Model type
Protein coding
Short Description
MATE efflux family protein
Curator Summary
AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+.
Computational Description
TX1; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04080.1); Has 9657 Blast hits to 9581 proteins in 1940 species: Archae - 182; Bacteria - 6693; Metazoa - 146; Fungi - 326; Plants - 1322; Viruses - 0; Other Eukaryotes - 988 (source: NCBI BLink).
Link
InterPro Scan - TAIR