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GT20394

CSHL Arabidopsis genetrap mutant lines

Original: GT20394

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20394

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9567989 [Map]; Strand: c
      • AT1G27540.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -83; Region: promoter
      • AT1G27540.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -101; Region: promoter
    Flanking Genome Sequence: GT20394 - 5-prime edge 
    TATAAGTGAT AATTATCCCG TTCAATTTTG TAACGAAACG ATCCGTGATG 
    GACGTCGTAT ATTGGGCCAT AGACCCGTTA AAATATAATT TCTTGCTGTT 
    ACTGGGCCTG GTGGTTCCTA ACTATAATGT CTTCCATTTC AATATGCGCA 
    ACTTAACGCC TCCTCAATCT TATCGAAAGA CGACATTAAA AGAAAAAAGA 
    AAAAAAACAG ACGAGATAAT GGAGAGATCT ACGCTCAAAC GAACATCGAG 
    TTTTCCAGAT ATTGAGGCTG TTC

AT1G27540.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27580.1); Has 275 Blast hits to 268 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 275; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27540.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27580.1); Has 278 Blast hits to 271 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 278; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR