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GT20399

CSHL Arabidopsis genetrap mutant lines

Original: GT20399

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20399

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8037460 [Map]; Strand: w
      • AT1G22710.1 - [+] show detail - sucrose-proton symporter 2
        Distance: -4343; Region: intergenic
      • AT1G22720.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 6772; Region: intergenic
    Flanking Genome Sequence: GT20399 - 5-prime edge 
    TTACGTTTTC CGTTTCGTTG ATACGTGTAG GTTTTTATTT ATTTATTTAA 
    GAAGCCTGAA TTTATCAAAA TCGAGAGGTT TGTTGATTTT GGAGTTTATT 
    TACACATGTT GTTGCATGTG AGATTACTTC GTTTACAATA ATTAGCTCGG 
    AAACATGTAC AAATGTCGCA TAACTTTTAC TCGTTACTCT CCATGCATTT 
    CAAACATGGA CAAACACAAA AAAATATTCC CAAATTTTAA CATTTTGAAA 
    TGGAATAGTT TTAGCAGTTT TTGTTAGAGC TTGGTAAAAA ATTTCATTAC 
    AAAAAAAAGA AGTTGGCAAA ATATATTGGA TCCAAGATTC GAACTAGTAT 
    GGTCCGAGAA AAATAAGGTT TTTGGATTCG AATCCGAATT TCTATATTTT 
    AAATTAAAAT CAAGATATAT AGATCCGTTT CATATATGGT TTTTTCTAAC 
    AAAATGTGTT TATGATTTAT AGTAAAGAAT ATTTCAAAAC AGGGTCTATA 
    TAGATAGACA TGTGTACGTC TAATGTGTAT ATATAGTCGC AAACTAATAA 
    CTATATATGG TTAAATCCAT ATTCTTCT

AT1G22710.1

Model type
Protein coding
Short Description
sucrose-proton symporter 2
Curator Summary
Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage.
Computational Description
sucrose-proton symporter 2 (SUC2); CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 1 (TAIR:AT1G71880.1); Has 2329 Blast hits to 2203 proteins in 568 species: Archae - 32; Bacteria - 908; Metazoa - 423; Fungi - 192; Plants - 420; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22720.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding, conserved site (InterPro:IPR018097), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding (InterPro:IPR001881), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase 4 (TAIR:AT1G21210.1); Has 17182 Blast hits to 16977 proteins in 349 species: Archae - 4; Bacteria - 9; Metazoa - 1405; Fungi - 31; Plants - 15495; Viruses - 26; Other Eukaryotes - 212 (source: NCBI BLink).
Link
InterPro Scan - TAIR