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GT20416

CSHL Arabidopsis genetrap mutant lines

Original: GT20416

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20416

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18753510 [Map]; Strand: w
      • AT2G45500.1 - [+] show detail - AAA-type ATPase family protein
        Distance: -659; Region: promoter
      • AT2G45500.2 - [+] show detail - AAA-type ATPase family protein
        Distance: -659; Region: promoter
      • AT2G45510.1 - [+] show detail - cytochrome P450, family 704, subfamily A, polypeptide 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20416 - 5-prime edge 
    TTTGCTGTTG ATGGAGAGAA ATGGACACAA CAGAGGAAGC TTTCGAGCTT 
    TGAGTTCTCT ACTAGAGTTT TAAGAGATTT TAGCTGCTCT GTTTTTAGGA 
    GAAATGCATC TAAGCTTGTT GGTTTTG

AT2G45500.1

Model type
Protein coding
Short Description
AAA-type ATPase family protein
Computational Description
AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 35953 Blast hits to 33523 proteins in 3228 species: Archae - 1492; Bacteria - 15478; Metazoa - 4981; Fungi - 3500; Plants - 2910; Viruses - 26; Other Eukaryotes - 7566 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45500.2

Model type
Protein coding
Short Description
AAA-type ATPase family protein
Computational Description
AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 35832 Blast hits to 33399 proteins in 3215 species: Archae - 1489; Bacteria - 15370; Metazoa - 4981; Fungi - 3599; Plants - 2905; Viruses - 24; Other Eukaryotes - 7464 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45510.1

Model type
Protein coding
Short Description
cytochrome P450, family 704, subfamily A, polypeptide 2
Curator Summary
member of CYP704A
Computational Description
"cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
Link
InterPro Scan - TAIR