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GT20453

CSHL Arabidopsis genetrap mutant lines

Original: GT20453

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20453

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 147466 [Map]; Strand: c
      • AT2G01280.1 - [+] show detail - Cyclin/Brf1-like TBP-binding protein
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: GT20453 - 5-prime edge 
    AAAATAAAAT GGAAAGAGAC TTACATCGTC GTGACAGCTC TTACATAATC 
    CATAACCAAA GCGTTTTAAA TCCTTATGTT TACAGTTCAC TACTCCTTTG 
    TCAGAATTTG GTCTTGGGGT AAAAGTTTCT TTACGCAATA TCTCTTCGCT 
    TTCATCAAGC TCATCAACCT AGACAAGCAT TGTACAACAT TTAAAAAAGA 
    ACCAACTAGA ATCGATTTGT AACATAATCC TGCAAATGAA ATTACTCACA 
    GTTAAACTTC CAGCCTCGGT ATCAGCAAAC TCATTCAATC TTTTGGTTAT 
    TGTTGCTTCA CACATATGCA CAACTTTTGC CTGAAAGTTA TATAGAAAAA 
    CACATCAAAT CGAAACATCT TTGCTCTCAT CTTATAACAA GATTCTTTAA 
    AGAAGCTTGA ATCAGATTCT TACAATATCT GCCCTAGAGT ACATGATACC 
    ATGAGAAAGT GCAGCCATGT AAATTGCTGC TCCACATATT CCACTTGGTT 
    TCCGGCCTGT CTGCAAGCGA ATAGATGGGC AACATTAACA CAAGCCATAA 
    TATATAACTC TTAAGACAAA GAACATGTAG GTAACTATCA CACCTGTATC 
    CAATCTCTCT TC

AT2G01280.1

Model type
Protein coding
Short Description
Cyclin/Brf1-like TBP-binding protein
Computational Description
maternal effect embryo arrest 65 (MEE65); FUNCTIONS IN: RNA polymerase II transcription factor activity, cation:chloride symporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670), Brf1-like TBP-binding (InterPro:IPR011665); BEST Arabidopsis thaliana protein match is: Cyclin/Brf1-like TBP-binding protein (TAIR:AT3G09360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR