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GT20540

CSHL Arabidopsis genetrap mutant lines

Original: GT20540

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20540

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8827644 [Map]; Strand: w
      • AT4G15430.1 - [+] show detail - ERD (early-responsive to dehydration stress) family protein
        Distance: -232; Region: promoter
      • AT4G15430.2 - [+] show detail - ERD (early-responsive to dehydration stress) family protein
        Distance: -232; Region: promoter
    Flanking Genome Sequence: GT20540 - 5-prime edge 
    CTTTCTCCAT CTACTATTGA GTTTTCTTGT CATCTTCTTT TCGCGTCAAC 
    GATTTTAGTT TACTCTTGAG TCTCTTTCAT AGTTTCATAG CAAGAGCATC 
    TTATTATTTC TTTCTTTCAC TGTAATAAAT TTAGAAGGCT CACATTTTGC 
    CAACTCCTCA ACACTTTATT TTCTCTTTTT TCTTCACGGA TTTATAAACA 
    ATAAATTTTG CAGTAATCTT TTCGTCGAAT GATCTTTGAA CATATTTCCT 
    AAATACCCGG CAAGAAAAAA TTCTGAATTT TTCTCATTAA TTTCTCCAAA 
    TATACAACTT TTCTTCTTCC TCTGTTTCTT CTTCTTCCTC TGTTTCTTCT 
    TCTGTTACTG GTCATCTCTC TC

AT4G15430.1

Model type
Protein coding
Short Description
ERD (early-responsive to dehydration stress) family protein
Computational Description
ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1447 Blast hits to 1280 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 705; Plants - 434; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G15430.2

Model type
Protein coding
Short Description
ERD (early-responsive to dehydration stress) family protein
Computational Description
ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1442 Blast hits to 1273 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 189; Fungi - 688; Plants - 448; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
Link
InterPro Scan - TAIR