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GT20543

CSHL Arabidopsis genetrap mutant lines

Original: GT20543

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20543

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5872026 [Map]; Strand: c
      • AT3G17203.1 - [+] show detail - pseudogene, gibberellin 2 beta-hydroxylase, blastp match of 50% identity and...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT20543 - 5-prime edge 
    TACTTTCTCC CTGCCTTCAG CCGTGAGGTC TAAGATCTCA CACGCCAACT 
    GCTTAATTGC TTCTACGCAC CCGACCACCG CAGAGCTGTC AAACAGACAT 
    ATCATACATC ATCACGAGTT GCTCATTATA AGAAATACAT ATATTATGAG 
    AGAAGAGAAA ACGTAGAGAC ATTAAGCTAT ATATATATAC ACTTTTAGGA 
    TGAAACTAAA CACGTCAGAG AGATAAGTGA AATTTCGAAA GCATAACAGT 
    TTCAGGGGGG GAAAAAGAGG AAAAAGGGAC GTTTTTATT

AT3G17203.1

Model type
Pseudogene
Curator Summary
a pseudogene initially named GA2ox5 and thought to be a member of the gibberellin 2-oxidase enzyme family. It was later shown to have a large DNA insert in the putative gene model.
Computational Description
pseudogene, gibberellin 2 beta-hydroxylase, blastp match of 50% identity and 1.1e-66 P-value to GP|5579092|gb|AAD45424.1||AF100954 gibberellin 2-oxidase-like protein {Pisum sativum}
Link
InterPro Scan - TAIR