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GT20620

CSHL Arabidopsis genetrap mutant lines

Original: GT20620

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20620

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18530727 [Map]; Strand: w
      • AT4G39955.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20620 - 5-prime edge 
    CTCCGATCTT GGCGACGGCA CCGTCTTCCA CTGTTGGATC CCACTTACTC 
    ACATCCACAC CAAGCCCACG CTCCTCCTCC TTCACGGGAT CGGAGCTAAC 
    GCTATGTGGC AGTGGGACCG CTTCATCGAC CGTTTTATCC CCCGCTTCAA 
    CGTCTACGTA CCGGACCTCA TCTTCTTTGG CGACTCCTAC ACCACTCGTC 
    CCGACCGCTC AGAGTCTTTC CAGGCGACTT GTGTCATGAA GGCGATGGAT 
    GCTTACGGTG TTAGGACCAT GACCGTCGCT GGCCTCAGCT ACGGTGGTTT 
    TGTGGCCTAC TCATTGGCGG CGCAGTTTAA GGAGAGGGTA GATCGAGTTG 
    TGCTAATATG CGCCGGTG

AT4G39955.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR