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GT20708

CSHL Arabidopsis genetrap mutant lines

Original: GT20708

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20708

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 403648 [Map]; Strand: c
      • AT4G00940.1 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20708 - 5-prime edge 
    TAATGACCTC AGCCTATCCT TCTCCTCCCC TATGCAAGAC AAGCGAGCTC 
    AAGGGCATTA CGGTCATTTC AGTGAGCAAG TTGTGACAGG AGGGCAGAAC 
    TGTCTTTTCC AAGCTCCTAT GGGAATGATT CAGTTTCGTC AAGAGTATGA 
    TCATGAGCAC CCCAAAAAGA ATCTTGGGTT TTCATTAGAC AGGAACGAGG 
    AAGAGATTGG TAATCATGAT AACTTCGTTG TTAATGTGGA AGGAAGTAAG 
    ATGATGTATC CTTATGGAGA TCATGAAGAC CGTCAACAAC ATCACCATGT 
    GAGACACGAT GATGGTAATA AGAAGAGAGA AGGTGGTTCA AGCAATGAGC 
    TATGGAGCGG AATCATCCTA GGTGGTGATA GTGGTGGACC AACATGGTGA 
    TATGAATATT GTCAAAAAGG ACAAGATGAT AAAGACAAAA ACAAATAGTT 
    ACGAGCAAAA ATATGTGATT ATATTTGGAA TTTTCAGACC CGGAAGAGTC 
    GCCTTGGGAG GAGCATGATG ATTCTTCTTT CCACTTTCAA TAAATTCCTC 
    TGGTCACTTT TCTTTGGCT

AT4G00940.1

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Computational Description
Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR