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GT20723

CSHL Arabidopsis genetrap mutant lines

Original: GT20723

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20723

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9783176 [Map]; Strand: c
      • AT4G17565.1 - [+] show detail - F-box family protein with a domain of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20723 - 5-prime edge 
    CTTTCTCCCT AACCCATTCC ACCTCTATCA GTCCAAATAT GAGCTATCCA 
    AACTTCAAAT ACAACCGATC AGCTTGTCTC TGGATAAACA ACATAACCAA 
    AGATTACCTA GTTGTTTGGC CCATCTATAA CAAATGTTTT TTTACAAAGA 
    AAGGTGATGA CACATGGCGA TTCGCTCCCG CTTGTCACAT TCGGATGAAA 
    GATCAAATTA TCTATAATCA CAAAGATCAC AAGGTTTACC AGTATGCTTC 
    CTATGGCTTT ATCTATGTTT GGGATTTCTC TAGTGATATC CCTCATGTAG 
    ATAAGCATCT ACCAGCTGTT AGCTTCATCT CACTCGA

AT4G17565.1

Model type
Protein coding
Short Description
F-box family protein with a domain of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G05970.1); Has 496 Blast hits to 483 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 496; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR