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GT20812

CSHL Arabidopsis genetrap mutant lines

Original: GT20812

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20812

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2359355 [Map]; Strand: w
      • AT1G07640.3 - [+] show detail - Dof-type zinc finger DNA-binding family protein
        Distance: -3128; Region: intergenic
      • AT1G07650.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase
        Distance: 194; Region: intergenic
    Flanking Genome Sequence: GT20812 - 5-prime edge 
    TACTTTCTCC CTGCCTACGA ATGTTAATCA CAGGGACATA TATATCTTTT 
    GTGTGCATTT GTGCGACTCA AACTTTTTAT CAAAGTTGGT TTGATTGTGT 
    CCTTCGATAT GTCCTTAGTA TATTGACACA TAATTATGTC TAGAGAGATA 
    TATGCTATAT TCAAGTTATT TTATCTGATT TAGCTCACGT TTAAACAAGG 
    TTTGATCTGC AGATAAAGAG AAGCAAGTAG CGAACACAAA AATGAGGAAC 
    AGAGATAGTG CCAAGCATTA TTTTTGTCTG ATTTTTGAGC TTGTTCGTTT 
    CATTACCGCT GGCGGTTGCG GCTGCGGCTG CGGCAAACAC TACCGCCTTT 
    ATA

AT1G07640.3

Model type
Protein coding
Short Description
Dof-type zinc finger DNA-binding family protein
Curator Summary
A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis.
Computational Description
OBP2; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT2G28810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G07650.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase
Computational Description
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G53430.1); Has 190432 Blast hits to 138472 proteins in 4783 species: Archae - 131; Bacteria - 16225; Metazoa - 53388; Fungi - 11706; Plants - 85318; Viruses - 481; Other Eukaryotes - 23183 (source: NCBI BLink).
Link
InterPro Scan - TAIR