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GT20860

CSHL Arabidopsis genetrap mutant lines

Original: GT20860

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20860

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 49269 [Map]; Strand: c
      • AT4G00130.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 201; Region: intergenic
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: 1897; Region: intergenic
    Flanking Genome Sequence: GT20860 - 5-prime edge 
    CTTTCTCCCT GCCAACCCAG CTGAACTTCA CAAGGTATGC ATATGATAAC 
    ACACATTGAC AAGTCGAAGA ACTAATAGGG CTAATCCATC TTCTGTCTAA 
    TATCATAGAA ACCGAACAAG AATAATAAAT AAAAGGGTTT TATACCCAAA 
    CCAAACATCC AACATTATAT AGGGGCATAA AGAAAATACG AAAAAGACTT 
    AGATAAGGAT TTAGTTCCAC AAGCTAACAA AAAGACTCAA AATGCATAAT 
    AAGAAATAAA AAGACAAACC GCTCAAGATT CAGCTTTGAA CATCATCGCT 
    TCAGTTTTGT TCATAAGCAC AGACCTCTGG TAAAGTAGCT CAAACTGCTT 
    ATCCTTAAAC TTCTTCCATT TTTCCTCCAC TTCTCTCTTC TCAGCTCCAT 
    CCTCAACATT TTCCCAACCC GCAGTTAATT TAGATTCATC CAAACCACAA 
    GAACTCCCGA ACGGCACCAT CTCTCTACCA ATGGAGAGAC CTTCGTTCAC 
    AACCTTTGCG TCTGTTTCTT CAGGTT

AT4G00130.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1); Has 94 Blast hits to 94 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR