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GT20861

CSHL Arabidopsis genetrap mutant lines

Original: GT20861

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20861

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28672521 [Map]; Strand: w
      • AT1G76420.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT20861 - 5-prime edge 
    CTTTCTCTCT CTCGACTATG AAGGTAGCTG ATTTGGTTAT GGATTAATCC 
    AACATTTTTT CTGTCTCCTG TTTTATTGAA CACTCTGCAA ATCACCCATT 
    CCTCCTGTGA ATTTCCACCA AAAAGAAATG AAAAACCAAA ACATGTTATT 
    ACACATTATA TAATGCCTAC ACCTTAAGAT CTTGTTTGAA ATGTGAGCCT 
    GACAAATTGA TTTCTGATAA TGATAAATGT AATTAGAAAG GTGGGATACA 
    AAAGAAAACA ATAGTGATGG AAAACGACAC AACAGTGTAT CGGTGAACAG 
    AAAACGGCAA GGTGTGTTTG GTGTTGACAT CCACACCACA CGTACAGGTT 
    TATATCAAAT CTATCACATC TAAACTGCTC TCTCCCCTGT CCTCCCCATA 
    CTAAGCCAAA CAACATAGTG ACAATACTAT TGAAACAAAA CACATGAAAT 
    GGGAAAAAAA AAGTTAAATA TTTCGTTAAA CCTTTCTTTT CAACTTGTGG 
    ATTTAAAAAG TTAACACATT AATGGAGAAC AAAAACATCA AATTTCTATT 
    ACATTCGCAA AGTTAAAAAA AATTTAATGT TATAAAAAAT GGACGTGTGG 
    GAATAAAAGT AACAGGG

AT1G76420.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curator Summary
Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac.
Computational Description
CUP SHAPED COTYLEDON3 (CUC3); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2); Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3005; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR