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GT20884

CSHL Arabidopsis genetrap mutant lines

Original: GT20884

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20884

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1312044 [Map]; Strand: w
      • AT4G02950.1 - [+] show detail - Ubiquitin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT20884 - 5-prime edge 
    CTTTCTCCCT GGTTAAATGC AAGAGAGGGG TGAGTTAAAT CTGCCTCAAG 
    GAATGTATTA CTTAATACAC AAGCATAAGC AGGCTGTATT ACACGAAGAT 
    CAGTCATTCT TGACGAACGG TGTTGCTTAC GGTGATACGA TTCAGATTTC 
    CCAAGTGGTT GAACGTTTGA TCACTAATCG ATCTTAAATT CTTTTTCTTA 
    TTGGTTTTAG TCTTTCTTCA AGTTTTCTTG CTTTTTTCCA AAGTTCACAG 
    CTTTCTGAAA TATCCTAACA CATGTAATAC CAATATGAGC TCAAAGAAGA 
    GAAATAAGTT CTTGTTGAGT TACTATAAGC TCTGTGTACA TTCTAATTCA 
    CATTTCTTTT ACTACTTTAA TGTATCACTA GTACAAAGAT CAAATGTTGA 
    ATCTTTATTG ACAAAGCAGA GCAAAAGACA GTAAAGTTTC TTGCTTTATT 
    CAAAAACTAA AACCAAAGAA AAATCACATT ACTAATTTGC TTATAAACAC 
    TCTGCGACTA ATAACCGTTG GATCATATCA GTAAGGAGAG AAATCACGAA 
    ATTAGCAAAC TCTCGTCACA AATCATCAGT TTCTCTTTCT CTCTTCCTCA 
    TTTAGTCTCT CTCCACTGAT CTTGAGACTA CAACGATGAA CGTGTACATC 
    GATACTGAAA CTGGCTCATC GTTCTCCATT ACTATTGATT TCGGCGAAA

AT4G02950.1

Model type
Protein coding
Short Description
Ubiquitin family protein
Computational Description
Ubiquitin family protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin family protein (TAIR:AT4G03360.1); Has 317 Blast hits to 308 proteins in 82 species: Archae - 0; Bacteria - 3; Metazoa - 57; Fungi - 34; Plants - 166; Viruses - 17; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR