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GT20923

CSHL Arabidopsis genetrap mutant lines

Original: GT20923

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20923

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 854028 [Map]; Strand: c
      • AT2G02930.1 - [+] show detail - glutathione S-transferase F3
        Distance: -1806; Region: intergenic
      • AT2G02950.1 - [+] show detail - phytochrome kinase substrate 1
        Distance: 919; Region: intergenic
    Flanking Genome Sequence: GT20923 - 5-prime edge 
    CACATGACAA AAAATGGCTG AGAGAAGTTT CTATTTAATT CCATAGAGTT 
    TGTGGTGAAA CATTCACTGT CTTGATGTGA AAGGGGTTCG TTCCTCAGGA 
    GCCCACCAAG AGAAGGAGAA GAATCTTGTG TGGTCGTTTG CTGCATCTCC 
    ATTACTTCAT CTCACTCGA

AT2G02930.1

Model type
Protein coding
Short Description
glutathione S-transferase F3
Curator Summary
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase F3 (GSTF3); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: plasma membrane, cytoplasm; EXPRESSED IN: phloem, leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 13914 Blast hits to 13903 proteins in 1392 species: Archae - 0; Bacteria - 7907; Metazoa - 1739; Fungi - 775; Plants - 1190; Viruses - 0; Other Eukaryotes - 2303 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02950.1

Model type
Protein coding
Short Description
phytochrome kinase substrate 1
Curator Summary
Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling.
Computational Description
phytochrome kinase substrate 1 (PKS1); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 2 (TAIR:AT1G14280.1); Has 564 Blast hits to 331 proteins in 102 species: Archae - 0; Bacteria - 114; Metazoa - 82; Fungi - 26; Plants - 127; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink).
Link
InterPro Scan - TAIR