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GT20969

CSHL Arabidopsis genetrap mutant lines

Original: GT20969

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20969

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30351597 [Map]; Strand: w
      • AT1G80760.1 - [+] show detail - NOD26-like intrinsic protein 6;1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT20969 - 5-prime edge 
    GACCGGTCGA TAATATAACG ATCATAACCG CCAGACCAGC CGAGGCGGCG 
    CAACCAATAA GCGTCTCAGC TCCATCTGTC TTCTGATTCA CGATCGCCGT 
    CGCTGTTCCG GCGAATATCA GGATCAATGT CCCAACAAAC TCTGCTCCCA 
    ACTTTACAAG CACATATATG TATTGGTTCA ATGCTCAGTG AATTGGAAAC 
    ATGATTTATA TGGAGTGTAC TTGTAATGAG AATGTGTACA TATGTACCTT 
    GCGGTAGAGG GAAACGTTAG GGGGAGGGAG AGAGCAAGTG ACCGGAGGGA 
    GTCTTCCATC TTCAAGAGCC CATTCATTGT CAACACTGAA ACATTTGCAG 
    CTTTTGAGAA GTGACTTTGG TGTGTATCTA CCATTGTGTC CATTCCTCTT 
    CCCTTCGAAT CCTCCAAAGA GCGGCGCTCC TGGAGTCCCC GGGGTTGTCG 
    CCGGCGTTGA GGGCGTGGAT GGAATTTCCT CATGATCCAT GTAGAGGGTA 
    GAGATAGATG AGATCTAATT AATTTGAGGA TATATGTTTT TGCTATGATT 
    GTTTTTATGT GATGTAGAAC TAAGGGATGC GTAGGGTACG GTATTTATAG 
    AGGAAGGCAT GAGAGTTGAC TTATGAGTGA AGGACCCAAA ATAGATGATT 
    GATATTTGGT TGGAGTGAGG AGTAAGTGGG TTGGTAATCC TTAGTTTTAA 
    TGCATGTGTC CTA

AT1G80760.1

Model type
Protein coding
Short Description
NOD26-like intrinsic protein 6;1
Curator Summary
Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.
Computational Description
NOD26-like intrinsic protein 6;1 (NIP6;1); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 5;1 (TAIR:AT4G10380.1); Has 10266 Blast hits to 10221 proteins in 2131 species: Archae - 103; Bacteria - 5136; Metazoa - 1354; Fungi - 440; Plants - 2031; Viruses - 2; Other Eukaryotes - 1200 (source: NCBI BLink).
Link
InterPro Scan - TAIR