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GT20987

CSHL Arabidopsis genetrap mutant lines

Original: GT20987

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20987

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 94646 [Map]; Strand: c
      • AT2G01130.1 - [+] show detail - DEA(D/H)-box RNA helicase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT20987 - 5-prime edge 
    AAGCAGCGGA GATCTCTCTC CCTCTTTATA GTTTACTTTT GACTTACAGT 
    AGAGAGAGTT TAGAGTTTTG AATTTGGCTC CGATGACGAA TCGTCTTCCT 
    CCTTCGCTGT ACGTTCCGCC TCACCAGCGC CTTGGTTCCG ATTACGGCTT 
    CAATCCTGTT CATCTCTCTC GACTACGCTA TGTCTCCGCT TATGATGACC 
    GCGTTTCCGA GGATCGCCAA CCGGTTAACT TCTTCTTCAT CTTTTTTTCA 
    TGCATCTCTG AGCTTATTGA TTGATGCTCT TACAATGGCG ATTCTAGTTT 
    TCGATTTGCT CTCGAGTAGT ATTTTATAAA AATCCCTTTA TCTTTCTACT 
    GGAACCATAT CAATTTGCAG CAGGAGGGTA CCTTTCACTG TGCCGACTTG 
    GATGATTGGA ATAAGAGATT TTCAATGCTT TTGAAAGATT CTTTAAAGCA 
    AGAAGTTATT TCCAGGGAGA AAAAAGATAG ACGGGATTTT GATAAACTTG 
    CTGCTCTGGC TACAACCCTG GGATTGTATA GGTACATCAA TCATGCTGCT 
    CCTTTCTTTC

AT2G01130.1

Model type
Protein coding
Short Description
DEA(D/H)-box RNA helicase family protein
Computational Description
DEA(D/H)-box RNA helicase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Double-stranded RNA-binding (InterPro:IPR001159), Double-stranded RNA-binding-like (InterPro:IPR014720), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT1G48650.2); Has 13137 Blast hits to 8990 proteins in 1526 species: Archae - 10; Bacteria - 5358; Metazoa - 2929; Fungi - 1766; Plants - 978; Viruses - 93; Other Eukaryotes - 2003 (source: NCBI BLink).
Link
InterPro Scan - TAIR