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GT21047

CSHL Arabidopsis genetrap mutant lines

Original: GT21047

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21047

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9023981 [Map]; Strand: c
      • AT5G25880.1 - [+] show detail - NADP-malic enzyme 3
        Distance: -568; Region: promoter
    Flanking Genome Sequence: GT21047 - 5-prime edge
    GACCATTGGT TGATATAGAT AAGTTTTAAT CACTCTGGTT AAAAAAGAAT 
    CCAAAATTTT TCACAAATCA TAAAGGACTT TAAATTGTCA CAAATCAAAT
    TTAAGCCTTT AAATATACTC CTGTCAGAAG CCATTTAATT AAATTTTAGT
    TGCTAAACTA ACAAAGGAAA GCAATAGTAA TTTTGTATCA CTGTAAATGT
    CACGCATTTC AATGGCATAG TACTAGTAAA CTTGTCTCTT CAGGCTATTT
    CTAGTGTTCA CACGTAGGGG ATTAGGCGAT TAGCTATAAG CCTATCAACA
    TTACTAAAGA AAAAAAGAAT CGTTCGACAA TTTATTAGTT ATTTATTACG
    ATATTAATCA CCGTTCAGTG ACAGCTTTTT GAATTTCATC GGTACCACAA
    TATTATGAAA AAATTTACAC GCCAACGTCT TATCAAGTTC CGTTAATAAC
    AAATCTTGGA GGTAGATAGA TTCTTCGTCA ATATAGAGTT TATAAAAATG
    TCGTTTTATA CATGAACTTT TAAAAAGTGG ATATTCAATA TGTGAACTTT
    GACGTCAGTC AAATAAAATA TGATAAAAAC GTTGACCCGC CATTTAACAC
    AAATCAAAAT GTTGACTAGG CCAAAATTCC CGAAACGTTA ACTGGCATTA
    ACAGATCTGA TACCCGCCGT AAGCAGACGT TAATTACGTT AATTGTTTCT
    GTTAAAATCG AAAACGACGT CGTTTCATAT AAAATGAAAC AGCAAAATCC
    CCAATTCAAT TTTAAAATCC CTAATTCTAT CATCTTCTTC CATCTTCAAT
    CCCTAATTCG TCCATCTTCT AACTTAATCA AAC

AT5G25880.1

Model type
Protein coding
Short Description
NADP-malic enzyme 3
Curator Summary
The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals.
Computational Description
NADP-malic enzyme 3 (NADP-ME3); FUNCTIONS IN: malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity, oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor, malic enzyme activity; INVOLVED IN: N-terminal protein myristoylation, malate metabolic process, protein homooligomerization; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malic enzyme, NAD-binding (InterPro:IPR012302), Malic oxidoreductase (InterPro:IPR001891), Malic enzyme, conserved site (InterPro:IPR015884), Malic enzyme, N-terminal (InterPro:IPR012301), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NADP-malic enzyme 2 (TAIR:AT5G11670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR