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GT21057

CSHL Arabidopsis genetrap mutant lines

Original: GT21057

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21057

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7950522 [Map]; Strand: c
      • AT1G22500.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21057 - 5-prime edge 
    TTACCACTAG CGTTGATAAT CTCATCCGGA GACTGTATCG ACCGGGTATG 
    GTATGGAGGA GTTATAGAAA ATGGTCTCCG GTCCAGCCGA CCGTCTTGAT 
    CAAACCGTTC AAAGTAGAAA TAGTTCTTCT CTCTCGA

AT1G22500.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, cotyledon, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72200.1); Has 9627 Blast hits to 9604 proteins in 288 species: Archae - 0; Bacteria - 2; Metazoa - 2532; Fungi - 813; Plants - 4919; Viruses - 76; Other Eukaryotes - 1285 (source: NCBI BLink).
Link
InterPro Scan - TAIR