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GT21106

CSHL Arabidopsis genetrap mutant lines

Original: GT21106

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21106

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19493095 [Map]; Strand: c
      • AT2G47500.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21106 - 5-prime edge 
    ACACTAGTCC GATCCAAATA AGATCGGAGA CAGAGAGATA TATGAGAAAC 
    GGTAGAACAA ACAAAAAAAA AAAAGAACTG GGAAAATTCC TCCCCGGTTT 
    TTTTGGGTAA ACAGGTTGGG GAAAAAATTT AAAAGGAATG GAAAAATTAA 
    TTTAAAAAAA AAAAAAATTT AAAACCCCTA AACCCCCTGA ATGGGCCCCC 
    CAAAACCAAG GTGGAAAACC AAAACCGGCT TAAACCCCGG TGGCCCCCTC 
    CCCCCTTCCC CCTCCCCCCA ATCCTTCCCA ACCCCCTGGT TCCTTTCCTT 
    TTTCCCCCCC CAACCCAACC CTAAA

AT2G47500.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11938 Blast hits to 11443 proteins in 432 species: Archae - 0; Bacteria - 1; Metazoa - 5987; Fungi - 1397; Plants - 1883; Viruses - 0; Other Eukaryotes - 2670 (source: NCBI BLink).
Link
InterPro Scan - TAIR