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GT21121

CSHL Arabidopsis genetrap mutant lines

Original: GT21121

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21121

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4164637 [Map]; Strand: w
      • AT3G13010.1 - [+] show detail - hAT transposon superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21121 - 5-prime edge 
    AGGTAATGGA ACTTGTGAGC ATGGGGTTAC GTCCTTACAG ACATTTCCCA 
    AATGATACTT GAGACGATTA AAGTCATTCA TTCGCTTGTC GCAAAATGTG 
    CACTGAACCC GAGCTCCATC CTCCACCCAA GTTCCATAGT CATGAACATT 
    CACCACGATG CTAGCCATTG AAAAGATTCA CTTAAATGAA CCTACAGCAA 
    AAGAGTCAAA CGAAATGGTA GACAGACCCA TATCTTAAGA ATTATCGAAA 
    TTTTGGTTTT TAAGAGAATT ATCAGAAAAC AAAAAAAATC TACCCTAACT 
    TCAAAAATGG CTCATATTGA CTATGATGAC ACAGAAGATC AAAGCAAACA 
    ATTTTCTTCT AGAAAAACTC ACGAAAGCAA GACAAAAAAC AAGAACAAAC 
    TGGAACATAT GCGTGAGGAG AGAATAAAAA CCTGAGAGTG GTTGTGTCAG 
    AGGGAGTGAA AACGTCGCGT CGAATTACAG GAAGAGAGAT CAAATTGTCA 
    CAAATTCTTG TTGAGAGATA AATATTGTTT TGACTATGTA AATAATATTT 
    GTGTGTACAT GAGAGCATTA GTAGATTTGT TGGATATCTA TAAATCAACA 
    TTAGTGGCTC T

AT3G13010.1

Model type
Protein coding
Short Description
hAT transposon superfamily protein
Computational Description
hAT transposon superfamily protein; FUNCTIONS IN: protein dimerization activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: HAT dimerisation (InterPro:IPR008906), Protein of unknown function DUF659 (InterPro:IPR007021); BEST Arabidopsis thaliana protein match is: hAT transposon superfamily protein (TAIR:AT3G13020.1); Has 542 Blast hits to 530 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 539; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR