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GT21150

CSHL Arabidopsis genetrap mutant lines

Original: GT21150

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21150

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3504467 [Map]; Strand: c
      • AT3G11180.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G11180.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21150 - 5-prime edge 
    TGGCCATATT GCAGTCATCC CGAATTAGAA AATACGGTAA CGAAACGGGA 
    TCATCCCGAT TAAAGACGGG ATCCTGGTGA AACGGTCGGG AAACTAGTGA 
    GGTTGCTCTC GGCTAGAGAT TGGACTCGGA CGATGGGTTC TGGCCACTTT 
    TCGCCGAGGC CACTCTTGTT CTTGATTTCG ATCTTGTTCA TCTCTCTCGA 
    CCAAACACAC GNGATTTTAT TGTTTACCCC GGATTGGTCA TGCGTTCCTT 
    CTTCTCACTC GA

AT3G11180.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8772 Blast hits to 8716 proteins in 1011 species: Archae - 0; Bacteria - 1149; Metazoa - 114; Fungi - 1021; Plants - 4999; Viruses - 0; Other Eukaryotes - 1489 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11180.2

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1).
Link
InterPro Scan - TAIR