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GT21155

CSHL Arabidopsis genetrap mutant lines

Original: GT21155

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21155

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20164639 [Map]; Strand: c
      • AT5G49660.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT21155 - 5-prime edge 
    TGTACAAAAA ACATGAACCC TTCTTTTGTT TTTATAAGCC TATCAACAAT 
    TTGCAGTCTT TCAACTTGTA AACTTTAGCT TCTTCTTCCT CTCTTTTTCT 
    CCCAAACACA AAATTTCTCT CTCTTTTCTT GCAACCTAAG TTAGCTCCTC 
    TAGGTTACTT TTGATCTTTC TCTGAAATGC GTCTCAAAAA TTTCCCCTTT 
    TTTGTTCTCT TCTTCTTCTT TTGCTTCAAC AGCAATCAAT CATGGGGCTT 
    GATGAGTTCG AACCAACAAC CTCAATTCTT CAAACTTATG AAGAACTCTC 
    TCTTCGGCGA CGCTTTGTCC ACTTGGAATG TCTATGACGT TGGTACCAAC 
    TACTGTAACT TCACCGGCGT AAGATGTGAC GGTCAAGGGC TAGTCACCGA 
    TCTTGATCTT TCCGGTTTGT CACTCTCCGG GATTTTCCCT GATGGGGTTT 
    GCTCTTACTT CCCAAACCTC CGTGTACTTC

AT5G49660.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase family protein
Computational Description
Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G09970.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR