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GT21193

CSHL Arabidopsis genetrap mutant lines

Original: GT21193

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21193

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 14097595 [Map]; Strand: c
      • AT1G37057.1 - [+] show detail - transposable element gene
        Distance: 158; Region: intergenic
      • AT1G37063.1 - [+] show detail - transposable element gene
        Distance: 3998; Region: intergenic
    Flanking Genome Sequence: GT21193 - 5-prime edge 
    TTGCGTGTTT TGCTATTCCC ATGTCAATGA TACCACGATC ACCTGCAATA 
    TCAATTAGTC TCCCCATATC ACTCCAATTG TCAAACCAGA AAGAGGTGCG 
    TGCACCATTC TTTATCTCTG TTCTATAAAG AGACTTCGCA ATATCTCTAT 
    ATTTGAGAAC TTTCTTCCAC ATCCATGAAC CCAGACATGT GTTATCTTTT 
    ACTGCCCAAA TAGACCCTTG TTTTAGGAGA GAAGATCTAA CCCATTCACC 
    CACAGCGAGT CCCCATTGGA GATGATACGC CATATTAATT TCAAGCACCA 
    TACATCATTC GCTTCTTTAA GAGACCGTAA CCCAAGACCC CCTTCTTGTT 
    TCGGCTTACA CACATCTTCC CATGCGATTT TTTGCTTTTG TTGTTTGTAG 
    ATCACCACCG GACCATAAGT ACGCAGAACA CAACTTATCA ATTTCTCTTA 
    TGCACGCTCG AGAGAGAGAC GAAATGCTCC CATCCAGAAG TTACATATGC 
    TCCAAAGAAC TGAACTTACT AGGTTTAATC TGCCTCCATA AGACAAATAA 
    CGTGCCGACC AAGAACCAAT TTTCTTTTTT ATTTGTTCCA AGAGAGGTAG 
    ATAGTCGGTA GAAGAAAGAC CTTTTGTGAC GAGAGGAAGT CCCAAATATC 
    TCACTGGGAG GGTACCAACT GCAAAGGGAA ATCGATCGGC TATATCATGA 
    TGAGAATTGT CTGTCACTCC GGCAAGATAA ACTGTTGATT TTTCCATACT 
    TATTCTCAGT CCCGAACATC TAGCAAACAC ATCAAACACT TCCACAATTC 
    CTTCTATAGA CCGCAC

AT1G37057.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 7.8e-25 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT1G37063.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
transposase-related, weak similarity to Tam3-transposase (Antirrhinum majus) GI:16064, PIR|A39652 Hobo element transposase HFL1 (Drosophila melanogaster)
Link
InterPro Scan - TAIR