1. Home
  2. Mutant Lines
  3. GT21198

GT21198

CSHL Arabidopsis genetrap mutant lines

Original: GT21198

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21198

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2730468 [Map]; Strand: w
      • AT2G06822.1 - [+] show detail
        Distance: -1393; Region: intergenic
      • AT2G06830.1 - [+] show detail - transposable element gene
        Distance: 9403; Region: intergenic
    Flanking Genome Sequence: GT21198 - 5-prime edge 
    GACTGCAGCC CACAACTAAG TTTCGTTGAA TAGTCTAAAA GCTTCTAGAG 
    ACGGCCGTGA AGGAGGTTGG TTTAGAAAGT TATGGTCATG GAACAAGGAG 
    GAATATGTAC CTGTTTATAA CGATTAAAGG AGGTTGGTTT AGAAAGTTAT 
    GGATGAAGGA ATTTGTACAT GTTTATAACG ATTTAAAAAA TTAATCACAA 
    ATTCAATTCG GGTAAATATT GAATTAAATC TATGTCACGT GTACCACAAA 
    TGCATATCAT ATATATATAT ATTACATAAT AAACATTTAT GTCACGTGTA 
    CCACAAATAT AAATATAAGG TTTTGTATAA AACAAAACTT CGAAGTTATC 
    CATTGCAACT TTACTTTCTA TTTCCAAAAA CTACAAAATA ATTTTATGAA 
    GTTTAAAATA ATGTATCTCA TTTTTGCAAC TTTACATATA TTGTAAATGT 
    TTCATGATCA CATATATTTG TTTTTGAAAA TTTGAAAGAT ATAGTTGAAC 
    TTCT

AT2G06822.1

Model type
Pseudogene
Curator Summary
Pseudogene of AT2G06822
Link
InterPro Scan - TAIR

AT2G06830.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78425.1| polyprotein (Arabidopsis thaliana) (AtRE1) (Ty1_Copia-element)
Link
InterPro Scan - TAIR