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GT21219

CSHL Arabidopsis genetrap mutant lines

Original: GT21219

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21219

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13613 [Map]; Strand: c
      • AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -254; Region: promoter
      • AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT21219 - 5-prime edge
    CAGCTTCCTC TTGGCTCGCT GTGCTGGATT CGCGAAGATC GAGCAGCTTG 
    TTCGAAAACC GGCACGACGA GTGCGGCGGA GTGGAGGAGA ACATGCCGAC
    AGCGAGAGCG CGAGCGCCAT GTTTGCAAAT TGCAATTTCC ATGGTTAGGT
    TGTTGCACGA AGAAGAAGAA GAGATACTCT GTTATTTGGG TTTCTTTTCT
    AAAAAGCCCA TTTGGGTTTT ATTTGCTTTA TCTCATGAGT CTAAGCCCAA
    GCCCAAGGAA ATAGTTTGCA CGTGCGCGTC ACGTGTCTAC GATAAAACCC
    CAGCAACGGC GAGCGGCTTT GCCTTGCTCA TTCAACCTCG CTCGTCGTCG
    TCGTCGTCTC CACTTCGATT TTTCAATCAG TAATATTGGT GGTTCAGAGA
    TGATGATGAT GAATCTTTTA AGGAGATCAG CGATAGCCAT CGGCCGCCAA
    TCAAAATCGA AACTGGCGTC GTTTTCCTCC GCTACACAAC CTTGTTCCGG
    AATCCCAAAA TCGGTAAGGC TTTCGTATTT C

AT4G00026.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00030.1

Model type
Protein coding
Short Description
Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description
Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR