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GT21231

CSHL Arabidopsis genetrap mutant lines

Original: GT21231

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21231

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1957544 [Map]; Strand: c
      • AT3G06430.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT21231 - 5-prime edge
    TTACACTCGC AGCAATCTCA TCGACGATGC TTTTTCAATT CTTGATAAAA 
    TGAAAAGCTT TCCTCAATGC CAACCTGATG TTTTCACGTA CAGCACTCTG
    CTCAAGGCTT GTGTGGATGC TTCTCAGTTT GACTTGGTGG ATTCGTTATA
    CAAGGAAATG GACGAGCGTT TGATAACTCC AAACACTGTG ACCCAGAACA
    TAGTTTTAAG TGGGTACGGT AGGGTCGGAA GGTTTGATCA GATGGAGAAA
    GTTTTGTCTG ATATGTTGGT GAGTACTGCT TGCAAACCCG ATGTGTGGAC
    TATGAATATC ATCCTTAGTG TGTTTGGAAA CATGGGTAAG ATAGACATGA
    TGGAGAGCTG GTACGAAAAG TTCAGGAACT TTGGGATTGA GCCAGAGACT
    CGGACTTTCA ATATTTTGAT TGGTTCTTAT GGGAAGAAGA GAATGTATGA
    TAAGATGTCG TCTGTCATGG AATACATGCG AAAGCTAGAG TTTCCGTGGA
    CAACATCAAC CTACAACAAT ATCATCGAGG CGTTTGCGGA TGTTGGTGAT
    GCAAAGAACA TGGAGTTGAC ATTTGATCAG ATGCGTAGCG AAGGTATGAA
    AGCAGACACA AAGACCTTTT GCTGTCTCAT AAACGGATAT GCCAATGCCG
    GTCTTTTCCA CAAGGTGATA AGTAGTGTTC AGTTGGCTGC TAAGTTTGAG
    ATACCCGAGA ATACTGCCT

AT3G06430.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
embryo defective 2750 (EMB2750); INVOLVED IN: pollen tube development, embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G53170.1); Has 31867 Blast hits to 12007 proteins in 283 species: Archae - 3; Bacteria - 31; Metazoa - 288; Fungi - 376; Plants - 30037; Viruses - 0; Other Eukaryotes - 1132 (source: NCBI BLink).
Link
InterPro Scan - TAIR