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GT21232

CSHL Arabidopsis genetrap mutant lines

Original: GT21232

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21232

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17622102 [Map]; Strand: c
      • AT1G47860.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT21232 - 5-prime edge
    TGGAATAAAG CAGGAATCTA TTGTTAATGC ACGAATTAAA CAAGTACGAA 
    AATGGGATCT CTAGGGAAGG AAGAAGAATC TTTCTATTAA TGACGAGCCC
    GCGACTTAGG TGAATTGGAC GGATTACAAA GGATGATTTC TTCAACAAGC
    ATAAATGGAG TAAGAACGAG CCGATTGTAG ATGAAAGACG AGCTTGAGGC
    CGGAAGACGA TCTTGATAGC TGAACCTTGT AAAAGGCTGC CTACGTACCC
    TTAGAAAGGG ATCAAGCCAC ACGTAGTTCA TCTCACTCGA

AT1G47860.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 9.0e-40 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR